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My Publications

All Publications

2025

Sibony-Benyamini, Hadas ; Jbara, Rose ; Shubash Napso, Tania et al. / The landscape of Helicobacter pylori-mediated DNA breaks links bacterial genotoxicity to its oncogenic potential. ב-: Genome Medicine. 2025 ; כרך 17, מס' 1.
Hanout-Chuiko, Wessal ; Pachakar, Sunil ; Foqara, Rawan et al. / The nonamer code for RAG-mediated recombination in vivo. ב-: Nucleic Acids Research. 2025 ; כרך 53, מס' 22.

2023

Perez, Shira ; Lavi-Itzkovitz, Anat ; Gidoni, Moriah et al. / High-Resolution Genomic Profiling of Liver Cancer Links Etiology With Mutation and Epigenetic Signatures. ב-: CMGH. 2023 ; כרך 16, מס' 1. עמודים 63-81.

2022

Tarsalainen, Alina ; Maman, Yaakov ; Meng, Fei Long et al. / Ig Enhancers Increase RNA Polymerase II Stalling at Somatic Hypermutation Target Sequences. ב-: Journal of Immunology. 2022 ; כרך 208, מס' 1. עמודים 143-154.
Domovitz, Tom ; Ayoub, Samer ; Werbner, Michal et al. / HCV Infection Increases the Expression of ACE2 Receptor, Leading to Enhanced Entry of Both HCV and SARS-CoV-2 into Hepatocytes and a Coinfection State. ב-: Microbiology spectrum. 2022 ; כרך 10, מס' 6.

2021

Kanfer, Gil ; Sarraf, Shireen A. ; Maman, Yaakov et al. / Image-based pooled whole-genome CRISPRi screening for subcellular phenotypes. ב-: Journal of Cell Biology. 2021 ; כרך 220, מס' 2.

2020

Paiano, Jacob ; Wu, Wei ; Yamada, Shintaro et al. / ATM and PRDM9 regulate SPO11-bound recombination intermediates during meiosis. ב-: Nature Communications. 2020 ; כרך 11, מס' 1.
Callen, Elsa ; Zong, Dali ; Wu, Wei et al. / 53BP1 Enforces Distinct Pre- and Post-resection Blocks on Homologous Recombination. ב-: Molecular Cell. 2020 ; כרך 77, מס' 1. עמודים 26-38.e7.

2019

Canela, Andres ; Maman, Yaakov ; Huang, Shar yin N. et al. / Topoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity. ב-: Molecular Cell. 2019 ; כרך 75, מס' 2. עמודים 252-266.e8.
Senigl, Filip ; Maman, Yaakov ; Dinesh, Ravi K. et al. / Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation. ב-: Cell Reports. 2019 ; כרך 29, מס' 12. עמודים 3902-3915.e8.
Shinoda, Kenta ; Maman, Yaakov ; Canela, Andres et al. / Intra-Vκ Cluster Recombination Shapes the Ig Kappa Locus Repertoire. ב-: Cell Reports. 2019 ; כרך 29, מס' 13. עמודים 4471-4481.e6.

2018

Vian, Laura ; Pękowska, Aleksandra ; Rao, Suhas S.P. et al. / The Energetics and Physiological Impact of Cohesin Extrusion. ב-: Cell. 2018 ; כרך 173, מס' 5. עמודים 1165-1178.e20.
Vian, Laura ; Pękowska, Aleksandra ; Rao, Suhas S.P. et al. / Erratum : The Energetics and Physiological Impact of Cohesin Extrusion (Cell (2018) 173(5) (1165–1178.e20), (S0092867418304045) (10.1016/j.cell.2018.03.072)). ב-: Cell. 2018 ; כרך 175, מס' 1. עמודים 292-294.
Tubbs, Anthony ; Sridharan, Sriram ; van Wietmarschen, Niek et al. / Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse. ב-: Cell. 2018 ; כרך 174, מס' 5. עמודים 1127-1142.e19.

2017

Canela, Andres ; Maman, Yaakov ; Jung, Seolkyoung et al. / Genome Organization Drives Chromosome Fragility. ב-: Cell. 2017 ; כרך 170, מס' 3. עמודים 507-521.e18.

2016

Louzoun, Y ; Maman, Y. / A Predictor for the Effect of Amino Acid Composition on Cd4+t Cell Epitope Pre-processing. ב-: HLA. 2016 ; כרך 87, מס' 4. עמודים 215-216.
Maman, Yaakov ; Teng, Grace ; Seth, Rashu et al. / RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2. ב-: Nucleic Acids Research. 2016 ; כרך 44, מס' 20. עמודים 9624-9637.
Williams, Alan M. ; Maman, Yaakov ; Alinikula, Jukka et al. / Bcl6 is required for somatic hypermutation and gene conversion in chicken DT40 cells. ב-: PLoS ONE. 2016 ; כרך 11, מס' 2.
Louzoun, Y ; Maman, Y. / Effect of Protein Length and Number on the Evolution of Escape Mutations in Viruses. ב-: HLA. 2016 ; כרך 87, מס' 4. עמודים 218-218.

2015

Choi, Jaehyuk ; Goh, Gerald ; Walradt, Trent et al. / Genomic landscape of cutaneous T cell lymphoma. ב-: Nature Genetics. 2015 ; כרך 47, מס' 9. עמודים 1011-1019.
Liberman, Gilad ; Benichou, Jennifer I.C. ; Maman, Yaakov et al. / Estimate of within population incremental selection through branch imbalance in lineage trees. ב-: Nucleic Acids Research. 2015 ; כרך 44, מס' 5. עמודים e46.
Teng, Grace ; Maman, Yaakov ; Resch, Wolfgang et al. / RAG Represents a Widespread Threat to the Lymphocyte Genome. ב-: Cell. 2015 ; כרך 162, מס' 4. עמודים 751-765.
Maman, Yaakov ; Hershberg, Uri ; Louzoun, Yoram. / Viral CD8 T cell epitope nucleotide composition shows evidence of short- and long-term evolutionary strategies. ב-: Immunogenetics. 2015 ; כרך 67, מס' 1. עמודים 15-24.

2013

Agranovich, Alexandra ; Maman, Yaakov ; Louzoun, Yoram. / Viral proteome size and CD8+ T cell epitope density are correlated : The effect of complexity on selection. ב-: Infection, Genetics and Evolution. 2013 ; כרך 20. עמודים 71-77.
Hoze, Ehud ; Tsaban, Lea ; Maman, Yaakov et al. / Predictor for the effect of amino acid composition on CD4+ T cell epitopes preprocessing. ב-: Journal of Immunological Methods. 2013 ; כרך 391, מס' 1-2. עמודים 163-173.

2011

Maman, Yaakov ; Nir-Paz, Ran ; Louzoun, Yoram. / Bacteria modulate the CD8+ T cell epitope repertoire of host Cytosol-Exposed proteins to manipulate the host immune response. ב-: PLoS Computational Biology. 2011 ; כרך 7, מס' 10.
Maman, Yaakov ; Blancher, Antoine ; Benichou, Jennifer et al. / Immune-induced evolutionary selection focused on a single reading frame in overlapping hepatitis B virus proteins. ב-: Journal of Virology. 2011 ; כרך 85, מס' 9. עמודים 4558-4566.
Toussaint, Nora C. ; Maman, Yaakov ; Kohlbacher, Oliver et al. / Universal peptide vaccines - Optimal peptide vaccine design based on viral sequence conservation. ב-: Vaccine. 2011 ; כרך 29, מס' 47. עמודים 8745-8753.