Maman Lab

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Maman Lab

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2025

Hanout-Chuiko, Wessal ; Pachakar, Sunil ; Foqara, Rawan et al. / The nonamer code for RAG-mediated recombination in vivo. In: Nucleic Acids Research. 2025 ; Vol. 53, No. 22.
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Sibony-Benyamini, Hadas ; Jbara, Rose ; Shubash Napso, Tania et al. / The landcape of Helicobacter pylori-mediated DNA breaks links bacterial genotoxicity to its oncogenic potential. In: Genome Medicine. 2025 ; Vol. 17, No. 1.
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2023

Perez, Shira ; Lavi-Itzkovitz, Anat ; Gidoni, Moriah et al. / High-Resolution Genomic Profiling of Liver Cancer Links Etiology With Mutation and Epigenetic Signatures. In: CMGH. 2023 ; Vol. 16, No. 1. pp. 63-81.
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2022

Tarsalainen, Alina ; Maman, Yaakov ; Meng, Fei Long et al. / Ig Enhancers Increase RNA Polymerase II Stalling at Somatic Hypermutation Target Sequences. In: Journal of Immunology. 2022 ; Vol. 208, No. 1. pp. 143-154.
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Domovitz, Tom ; Ayoub, Samer ; Werbner, Michal et al. / HCV Infection Increases the Expression of ACE2 Receptor, Leading to Enhanced Entry of Both HCV and SARS-CoV-2 into Hepatocytes and a Coinfection State. In: Microbiology spectrum. 2022 ; Vol. 10, No. 6.
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2021

Kanfer, Gil ; Sarraf, Shireen A. ; Maman, Yaakov et al. / Image-based pooled whole-genome CRISPRi screening for subcellular phenotypes. In: Journal of Cell Biology. 2021 ; Vol. 220, No. 2.
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2020

Paiano, Jacob ; Wu, Wei ; Yamada, Shintaro et al. / ATM and PRDM9 regulate SPO11-bound recombination intermediates during meiosis. In: Nature Communications. 2020 ; Vol. 11, No. 1.
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Callen, Elsa ; Zong, Dali ; Wu, Wei et al. / 53BP1 Enforces Distinct Pre- and Post-resection Blocks on Homologous Recombination. In: Molecular Cell. 2020 ; Vol. 77, No. 1. pp. 26-38.e7.
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2019

Shinoda, Kenta ; Maman, Yaakov ; Canela, Andres et al. / Intra-Vκ Cluster Recombination Shapes the Ig Kappa Locus Repertoire. In: Cell Reports. 2019 ; Vol. 29, No. 13. pp. 4471-4481.e6.
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Senigl, Filip ; Maman, Yaakov ; Dinesh, Ravi K. et al. / Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation. In: Cell Reports. 2019 ; Vol. 29, No. 12. pp. 3902-3915.e8.
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Canela, Andres ; Maman, Yaakov ; Huang, Shar yin N. et al. / Topoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity. In: Molecular Cell. 2019 ; Vol. 75, No. 2. pp. 252-266.e8.
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2018

Vian, Laura ; Pękowska, Aleksandra ; Rao, Suhas S.P. et al. / The Energetics and Physiological Impact of Cohesin Extrusion. In: Cell. 2018 ; Vol. 173, No. 5. pp. 1165-1178.e20.
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Tubbs, Anthony ; Sridharan, Sriram ; van Wietmarschen, Niek et al. / Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse. In: Cell. 2018 ; Vol. 174, No. 5. pp. 1127-1142.e19.
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Vian, Laura ; Pękowska, Aleksandra ; Rao, Suhas S.P. et al. / Erratum : The Energetics and Physiological Impact of Cohesin Extrusion (Cell (2018) 173(5) (1165–1178.e20), (S0092867418304045) (10.1016/j.cell.2018.03.072)). In: Cell. 2018 ; Vol. 175, No. 1. pp. 292-294.
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2017

Canela, Andres ; Maman, Yaakov ; Jung, Seolkyoung et al. / Genome Organization Drives Chromosome Fragility. In: Cell. 2017 ; Vol. 170, No. 3. pp. 507-521.e18.
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2016

Louzoun, Y ; Maman, Y. / Effect of Protein Length and Number on the Evolution of Escape Mutations in Viruses. In: HLA. 2016 ; Vol. 87, No. 4. pp. 218-218.
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Williams, Alan M. ; Maman, Yaakov ; Alinikula, Jukka et al. / Bcl6 is required for somatic hypermutation and gene conversion in chicken DT40 cells. In: PLoS ONE. 2016 ; Vol. 11, No. 2.
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Louzoun, Y ; Maman, Y. / A Predictor for the Effect of Amino Acid Composition on Cd4+t Cell Epitope Pre-processing. In: HLA. 2016 ; Vol. 87, No. 4. pp. 215-216.
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Maman, Yaakov ; Teng, Grace ; Seth, Rashu et al. / RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2. In: Nucleic Acids Research. 2016 ; Vol. 44, No. 20. pp. 9624-9637.
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2015

Teng, Grace ; Maman, Yaakov ; Resch, Wolfgang et al. / RAG Represents a Widespread Threat to the Lymphocyte Genome. In: Cell. 2015 ; Vol. 162, No. 4. pp. 751-765.
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Liberman, Gilad ; Benichou, Jennifer I.C. ; Maman, Yaakov et al. / Estimate of within population incremental selection through branch imbalance in lineage trees. In: Nucleic Acids Research. 2015 ; Vol. 44, No. 5. pp. e46.
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Maman, Yaakov ; Hershberg, Uri ; Louzoun, Yoram. / Viral CD8 T cell epitope nucleotide composition shows evidence of short- and long-term evolutionary strategies. In: Immunogenetics. 2015 ; Vol. 67, No. 1. pp. 15-24.
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Choi, Jaehyuk ; Goh, Gerald ; Walradt, Trent et al. / Genomic landscape of cutaneous T cell lymphoma. In: Nature Genetics. 2015 ; Vol. 47, No. 9. pp. 1011-1019.
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2013

Hoze, Ehud ; Tsaban, Lea ; Maman, Yaakov et al. / Predictor for the effect of amino acid composition on CD4+ T cell epitopes preprocessing. In: Journal of Immunological Methods. 2013 ; Vol. 391, No. 1-2. pp. 163-173.
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Agranovich, Alexandra ; Maman, Yaakov ; Louzoun, Yoram. / Viral proteome size and CD8+ T cell epitope density are correlated : The effect of complexity on selection. In: Infection, Genetics and Evolution. 2013 ; Vol. 20. pp. 71-77.
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2011

Maman, Yaakov ; Nir-Paz, Ran ; Louzoun, Yoram. / Bacteria modulate the CD8+ T cell epitope repertoire of host Cytosol-Exposed proteins to manipulate the host immune response. In: PLoS Computational Biology. 2011 ; Vol. 7, No. 10.
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Maman, Yaakov ; Blancher, Antoine ; Benichou, Jennifer et al. / Immune-induced evolutionary selection focused on a single reading frame in overlapping hepatitis B virus proteins. In: Journal of Virology. 2011 ; Vol. 85, No. 9. pp. 4558-4566.
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Toussaint, Nora C. ; Maman, Yaakov ; Kohlbacher, Oliver et al. / Universal peptide vaccines - Optimal peptide vaccine design based on viral sequence conservation. In: Vaccine. 2011 ; Vol. 29, No. 47. pp. 8745-8753.
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