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Maiers, Martin ; Louzoun, Yoram ; Pymm, Philip et al. / Prediction of KIR3DL1 and human leukocyte antigen binding. In: Journal of Biological Chemistry. 2025 ; Vol. 301, No. 8.
Maiers, Martin ; Greco-Stewart, Valerie ; Madbouly, Abeer et al. / The Registry of Unmet Need : A World Marrow Donor Association Analysis of Patients Without an HLA Match. In: HLA. 2025 ; Vol. 105, No. 5.
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Israeli, Sapir ; Maiers, Martin ; Louzoun, Yoram. / Graph-Based Imputation Methods and Their Applications to Single Donors and Families. Methods in Molecular Biology. Humana Press Inc., 2024. pp. 193-214 (Methods in Molecular Biology).
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Israeli, Sapir ; Louzoun, Yoram. / Single-residue linear and conformational B cell epitopes prediction using random and ESM-2 based projections. In: Briefings in Bioinformatics. 2024 ; Vol. 25, No. 2.
Segal, Yahel ; Nisnboym, Michal ; Regev, Keren et al. / New Insights on DR and DQ Human Leukocyte Antigens in Anti-LGI1 Encephalitis. In: Neurology: Neuroimmunology and NeuroInflammation. 2023 ; Vol. 10, No. 3.
Levi, Reut ; Dvorkin, Shirit ; Louzoun, Yoram. / Shared bias in H chain V-J pairing in naive and memory B cells. In: Frontiers in Immunology. 2023 ; Vol. 14.
Israeli, Sapir ; Krakow, Elizabeth F. ; Maiers, Martin et al. / Trans-population graph-based coverage optimization of allogeneic cellular therapy. In: Frontiers in Immunology. 2023 ; Vol. 14.
Frydman, Shoval ; Louzoun, Yoram. / FODGE - Fast Online Dynamic Graph Embedding. Proceedings of the 2023 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2023. editor / B. Aditya Prakash ; Dong Wang ; Tim Weninger. Association for Computing Machinery, Inc, 2023. pp. 258-262 (Proceedings of the 2023 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2023).
Shalev-Ram, Hila ; Cirkin, Roi ; Cohen, Gal et al. / Is there a difference in labor patterns after induction with prostaglandins and double-balloon catheters?. In: AJOG Global Reports. 2023 ; Vol. 3, No. 3.
Ansbacher-Feldman, Zuriya ; Israeli, Sapir ; Maiers, Martin et al. / GRAMM : A new method for analysis of HLA in families. In: HLA. 2023 ; Vol. 102, No. 4. pp. 477-488.
Melka, A. B. ; Dori, N. ; Louzoun, Y. / Survival induced by short-scale autocorrelations in birth-death-diffusion models with negative growth. In: Physical Review E. 2023 ; Vol. 108, No. 3.
Levi, Reut ; Levi, Lee ; Louzoun, Yoram. / Bw4 ligand and direct T-cell receptor binding induced selection on HLA A and B alleles. In: Frontiers in Immunology. 2023 ; Vol. 14.
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Israeli, S ; Maiers, M ; Louzoun, Y. / Limited contribution of donor properties to one and two year survival post bone marrow transplant. In: HLA. 2022 ; Vol. 99, No. 5. pp. 498-498.
Feldman, Z ; Israeli, S ; Maiers, M et al. / Family based HLA imputation and optimization of haplo-identical transplants. In: HLA. 2022 ; Vol. 99, No. 5. pp. 489-489.
Ben Shachar, Shay ; Barda, Noam ; Israeli, Sapir et al. / MHC haplotyping of SARS-COV-2 patients : HLA subtypes are not associated with the presence and severity of COVID-19 in the Israeli population. In: HLA. 2022 ; Vol. 99, No. 5. pp. 447-447.
Levinas, Itay ; Louzoun, Yoram. / Planted Dense Subgraphs in Dense Random Graphs Can Be Recovered using Graph-based Machine Learning. In: Journal of Artificial Intelligence Research. 2022 ; Vol. 75. pp. 541-568.
Melka, A. B. ; Louzoun, Y. / High fraction of silent recombination in a finite-population two-locus neutral birth-death-mutation model. In: Physical Review E. 2022 ; Vol. 106, No. 2.
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Miron, Michelle ; Meng, Wenzhao ; Rosenfeld, Aaron M. et al. / Maintenance of the human memory T cell repertoire by subset and tissue site. In: Genome Medicine. 2021 ; Vol. 13, No. 1.
Melka, Akiva Bruno ; Louzoun, Yoram. / Evaluation of the number of undiagnosed infected in an outbreak using source of infection measurements. In: Scientific Reports. 2021 ; Vol. 11, No. 1.
Ben Shachar, Shay ; Barda, Noam ; Manor, Sigal et al. / MHC Haplotyping of SARS-CoV-2 Patients : HLA Subtypes Are Not Associated with the Presence and Severity of COVID-19 in the Israeli Population. In: Journal of Clinical Immunology. 2021 ; Vol. 41, No. 6. pp. 1154-1161.
Pinto, Y. ; Frishman, S. ; Turjeman, S. et al. / First trimester gut microbiome induces Inflammation-dependent gestational diabetes phenotype in mice. 2021.
Maiers, Martin ; Mehr, Ramit ; Raghavan, Malini et al. / Editorial : HLA and KIR Diversity and Polymorphisms: Emerging Concepts. In: Frontiers in Immunology. 2021 ; Vol. 12.
Izhak, Meirav Ben ; Eshel, Adi ; Cohen, Ruti et al. / Projection of gut microbiome pre- And post-bariatric surgery to predict surgery outcome. In: mSystems. 2021 ; Vol. 6, No. 3.
Dvorkin, Shirit ; Levi, Reut ; Louzoun, Yoram. / Autoencoder based local T cell repertoire density can be used to classify samples and T cell receptors. In: PLoS Computational Biology. 2021 ; Vol. 17, No. 7.
Israeli, Sapir ; Gragert, Loren ; Maiers, Martin et al. / HLA haplotype frequency estimation for heterogeneous populations using a graph-based imputation algorithm. In: Human Immunology. 2021 ; Vol. 82, No. 10. pp. 746-757.
Tickotsky-Moskovitz, Nili ; Louzoun, Yoram ; Dvorkin, Shirit et al. / CDR3 and V genes show distinct reconstitution patterns in T cell repertoire post-allogeneic bone marrow transplantation. In: Immunogenetics. 2021 ; Vol. 73, No. 2. pp. 163-173.
Frasch, Martin G. ; Lobmaier, Silvia M. ; Stampalija, Tamara et al. / Non-invasive biomarkers of fetal brain development reflecting prenatal stress : An integrative multi-scale multi-species perspective on data collection and analysis. In: Neuroscience and Biobehavioral Reviews. 2020 ; Vol. 117. pp. 165-183.
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Sarafian, Elad ; Sinay, Mor ; Louzoun, Yoram et al. / Explicit gradient learning for black-box optimization. 37th International Conference on Machine Learning, ICML 2020. editor / Hal Daume ; Aarti Singh. International Machine Learning Society (IMLS), 2020. pp. 8438-8448 (37th International Conference on Machine Learning, ICML 2020).
Louzoun, Y ; Maiers, M ; Gragert, L et al. / A Graph-based Multi Race Expectation-maximization (em) Algorithm. In: HLA. 2020 ; Vol. 95, No. 4. pp. 391-391.
Agius, Rudi ; Brieghel, Christian ; Andersen, Michael A. et al. / Machine learning can identify newly diagnosed patients with CLL at high risk of infection. In: Nature Communications. 2020 ; Vol. 11, No. 1.
Melka, A. ; Dori, N. ; Louzoun, Y. / Invasion Rate Versus Diversity in Population Dynamics with Catastrophes. In: Physical Review Letters. 2020 ; Vol. 124, No. 15.
Springer, Ido ; Besser, Hanan ; Tickotsky-Moskovitz, Nili et al. / Prediction of Specific TCR-Peptide Binding From Large Dictionaries of TCR-Peptide Pairs. In: Frontiers in Immunology. 2020 ; Vol. 11.
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van der Giessen, Janine ; Binyamin, Dana ; Belogolovski, Anna et al. / Modulation of cytokine patterns and microbiome during pregnancy in IBD. In: Gut. 2019 ; Vol. 69, No. 3. pp. 473-486.
Maiers, Martin ; Halagan, Michael ; Gragert, Loren et al. / GRIMM : GRaph IMputation and matching for HLA genotypes. In: Bioinformatics. 2019 ; Vol. 35, No. 18. pp. 3520-3523.
Damotte, V. ; Zhao, C. ; Lin, C. et al. / Multiple Measures Reveal The Value of Both Race And Geographic Ancestry For Self-Identification,. In: bioRxiv,. 2019 ; Vol. 701698.
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Louzoun, Yoram ; Lobkovsky, Alexander E. ; Levi, Lee et al. / Reply to Hedrick and Klitz : High haplotype discovery rate in the HLA locus. In: Proceedings of the National Academy of Sciences of the United States of America. 2019 ; Vol. 116, No. 47. pp. 23388-23389.
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Dori, Navit ; Piedrahita, Pablo ; Louzoun, Yoram. / Two stage approach to functional network reconstruction for binary time-series. In: European Physical Journal B. 2019 ; Vol. 92, No. 2.
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Wiseman, Anat ; Ben Izhak, Meirav ; Tal, Saar et al. / Epidemiological and genetic analysis of Avian avulavirus-1 in Israel reveals parallel circulating strains and a new sub-genotype within genotype VI. In: Infection, Genetics and Evolution. 2018 ; Vol. 66. pp. 159-170.
Naaman, Roi ; Cohen, Keren ; Louzoun, Yoram et al. / Edge sign prediction based on a combination of network structural topology and sign propagation. In: Journal of Complex Networks. 2018 ; Vol. 7, No. 1. pp. 54-66.
Feres, Magda ; Louzoun, Yoram ; Haber, Simi et al. / Support vector machine-based differentiation between aggressive and chronic periodontitis using microbial profiles. In: International Dental Journal. 2018 ; Vol. 68, No. 1. pp. 39-46.
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Kalinina, Olga ; Louzoun, Yoram ; Wang, Yue et al. / Origins and specificity of auto-antibodies in Sm+ SLE patients. In: Journal of Autoimmunity. 2018 ; Vol. 90. pp. 94-104.
Toledano, Adar ; Elhanati, Yuval ; Benichou, Jennifer I.C. et al. / Evidence for shaping of light chain repertoire by structural selection. In: Frontiers in Immunology. 2018 ; Vol. 9, No. JUN.
Maiers, M ; Louzoun, Y ; Pymm, P et al. / A Machine Learning Model That Predicts Binding Between Kir3dl1 and Hla Class I Allotypes. In: Human Immunology. 2017 ; Vol. 78. pp. 90-90.
Benichou, Jennifer Israel Cohen ; Louzoun, Yoram. / Estimate of within clones and between clone selection suggests a multi-stage selection process in the production of high affinity B cell receptors. In: Journal of Immunology. 2017 ; Vol. 198, No. 1 Supplement.
Benichou, Jennifer I.C. ; Van Heijst, Jeroen W.J. ; Glanville, Jacob et al. / Converging evolution leads to near maximal junction diversity through parallel mechanisms in B and T cell receptors. In: Physical Biology. 2017 ; Vol. 14, No. 4.
Louzoun, Y ; Benichou, J ; Kleinstein, S et al. / The Mutation Patterns in B Cell Ig Receptors Reflect the Influence of Selection Acting at Multiple Time Scales. In: HLA. 2016 ; Vol. 87, No. 4. pp. 275-275.
Illouz, Tomer ; Madar, Ravit ; Clague, Charlotte et al. / Unbiased classification of spatial strategies in the Barnes maze. In: Bioinformatics. 2016 ; Vol. 32, No. 21. pp. 3314-3320.
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Louzoun, Y ; Maman, Y. / A Predictor for the Effect of Amino Acid Composition on Cd4+t Cell Epitope Pre-processing. In: HLA. 2016 ; Vol. 87, No. 4. pp. 215-216.
Louzoun, Y ; Benichou, J ; Prak, EL et al. / The Restricted Dh Gene Reading Frame Usage in the Expressed Human Antibody Repertoire is Selected Based on Their Amino Acid Content. In: HLA. 2016 ; Vol. 87, No. 4. pp. 216-216.
Louzoun, Y ; Maman, Y. / Effect of Protein Length and Number on the Evolution of Escape Mutations in Viruses. In: HLA. 2016 ; Vol. 87, No. 4. pp. 218-218.
Louzoun, Y ; Slater, N ; Albrecht, M et al. / Power Laws for Heavy-tailed Distributions : Modeling Allele and Haplotype Diversity for the National Marrow Donor Program. In: HLA. 2016 ; Vol. 87, No. 4. pp. 211-211.
Slater, Noa ; Mitchell, Rebecca Mans ; Whitlock, Robert H. et al. / Impact of the shedding level on transmission of persistent infections in Mycobacterium avium subspecies paratuberculosis (MAP). In: Veterinary Research. 2016 ; Vol. 47, No. 1.
Behar, Hilla ; Louzoun, Yoram. / Commensal pathogens as a source of a coexistence mechanism. In: Journal of Theoretical Biology. 2015 ; Vol. 370. pp. 45-52.
Frasch, Martin G. ; Durosier, Lucien Daniel ; Gold, Nathan et al. / Adaptive shut-down of EEG activity predicts critical acidemia in the near-term ovine fetus. In: Physiological Reports. 2015 ; Vol. 3, No. 7.
Mitchell, Rebecca M. ; Schukken, Ynte ; Koets, Ad et al. / Differences in intermittent and continuous fecal shedding patterns between natural and experimental Mycobacterium avium subspecies paratuberculosis infections in cattle Modeling Johne's disease : From the inside out Dr Ad Koets and Prof Yrjo Grohn. In: Veterinary Research. 2015 ; Vol. 46, No. 1.
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Yaari, Gur ; Benichou, Jennifer I.C. ; Vander Heiden, Jason A. et al. / The mutation patterns in B-cell immunoglobulin receptors reflect the influence of selection acting at multiple time-scales. In: Philosophical Transactions of the Royal Society B: Biological Sciences. 2015 ; Vol. 370, No. 1676.
Louzoun, Yoram ; Mitchell, Rebecca ; Behar, Hilla et al. / Two state model for a constant disease hazard in paratuberculosis (and other bovine diseases) Modeling Johne's disease : From the inside out Dr Ad Koets and Prof Yrjo Grohn. In: Veterinary Research. 2015 ; Vol. 46, No. 1.
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Bodaker, Matan ; Meshorer, Eran ; Mitrani, Eduardo et al. / Genes related to differentiation are correlated with the gene regulatory network structure. In: Bioinformatics. 2014 ; Vol. 30, No. 3. pp. 406-413.
Louzoun, Yoram ; Xue, Chuan ; Lesinski, Gregory B. et al. / A mathematical model for pancreatic cancer growth and treatments. In: Journal of Theoretical Biology. 2014 ; Vol. 351. pp. 74-82.
Svicher, V ; Salpini, R ; Alteri, C et al. / Immunosuppression-driven HBV reactivation is characterized by HBsAg mutants with enhanced capability to escape immune response. In: Antiviral Therapy. 2014 ; Vol. 19, No. 2.
Rosen, Yonatan ; Louzoun, Yoram. / Directionality of real world networks as predicted by path length in directed and undirected graphs. In: Physica A: Statistical Mechanics and its Applications. 2014 ; Vol. 401. pp. 118-129.
Salpini, R ; Alteri, C ; Colagrossi, L et al. / HBsAg genetic elements critical for immune escape correlates with HBV reactivation upon immunosuppression. In: Digestive and Liver Disease. 2014 ; Vol. 46, No. SUPPLEMENT 1. pp. e11.
Slater, Noa ; Itzchack, Royi ; Louzoun, Yoram. / Mid size cliques are more common in real world networks than triangles. In: Network Science. 2014 ; Vol. 2, No. 3. pp. 387-402.
Itzhack, R ; Tsaban, L ; Louzoun, Y. / Long loops of information flow in genetic networks highlight an inherent directionality. In: Systems Biomedicine. 2013 ; Vol. 1, No. 1. pp. 34-35.
Liberman, Gilad ; Louzoun, Yoram ; Aizenstein, Orna et al. / Automatic multi-modal MR tissue classification for the assessment of response to bevacizumab in patients with glioblastoma. In: European Journal of Radiology. 2013 ; Vol. 82, No. 2. pp. e87-e94.
Benichou, Jennifer ; Glanville, Jacob ; Luning Prak, Eline T. et al. / The restricted DH gene reading frame usage in the expressed human antibody repertoire is selected based upon its amino acid content. In: Journal of Immunology. 2013 ; Vol. 190, No. 11. pp. 5567-5577.
Agranovich, Alexandra ; Maman, Yaakov ; Louzoun, Yoram. / Viral proteome size and CD8+ T cell epitope density are correlated : The effect of complexity on selection. In: Infection, Genetics and Evolution. 2013 ; Vol. 20. pp. 71-77.
Hoze, Ehud ; Tsaban, Lea ; Maman, Yaakov et al. / Predictor for the effect of amino acid composition on CD4+ T cell epitopes preprocessing. In: Journal of Immunological Methods. 2013 ; Vol. 391, No. 1-2. pp. 163-173.
Davidovich, Hadar ; Louzoun, Yoram. / The balance between adaptation to catalysts and competition radius shapes the total wealth, time variability and inequality. In: European Physical Journal B. 2013 ; Vol. 86, No. 5.
Liberman, Gilad ; Benichou, Jennifer ; Tsaban, Lea et al. / Multi step selection in Ig H chains is initially focused on CDR3 and then on other CDR regions. In: Frontiers in Immunology. 2013 ; Vol. 4, No. SEP.
Agranovich, Alexandra ; Louzoun, Yoram. / Predator-prey dynamics in a uniform medium lead to directed percolation and wave-train propagation. In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 2012 ; Vol. 85, No. 3.
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Brot, Hilla ; Muchnik, Lev ; Goldenberg, Jacob et al. / Feedback between node and network dynamics can produce real-world network properties. In: Physica A: Statistical Mechanics and its Applications. 2012 ; Vol. 391, No. 24. pp. 6645-6654.
Magori-Cohen, Reuma ; Louzoun, Yoram ; Herziger, Yael et al. / Mathematical modelling and evaluation of the different routes of transmission of lumpy skin disease virus. In: Veterinary Research. 2012 ; Vol. 43, No. 1.
Louzoun, Yoram ; Ganusov, Vitaly V. / Evolution of viral life-cycle in response to cytotoxic T lymphocyte-mediated immunity. In: Journal of Theoretical Biology. 2012 ; Vol. 310. pp. 3-13.
Cohen, Reuma Magori ; Kleinstein, Steven H. ; Louzoun, Yoram. / Somatic hypermutation targeting is influenced by location within the immunoglobulin V region. In: Molecular Immunology. 2011 ; Vol. 48, No. 12-13. pp. 1477-1483.
Liberman, Gilad ; Louzoun, Yoram ; Colliot, Olivier et al. / T 1 mapping, AIF and pharmacokinetic parameter extraction from dynamic contrast enhancement MRI data. Multimodal Brain Image Analysis - First International Workshop, MBIA 2011, Held in Conjunction with MICCAI 2011, Proceedings. 2011. pp. 76-83 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
Maman, Yaakov ; Blancher, Antoine ; Benichou, Jennifer et al. / Immune-induced evolutionary selection focused on a single reading frame in overlapping hepatitis B virus proteins. In: Journal of Virology. 2011 ; Vol. 85, No. 9. pp. 4558-4566.
Lavi, Orit ; Ginsberg, Doron ; Louzoun, Yoram. / Regulation of modular cyclin and CDK feedback loops by an E2F transcription oscillator in the mammalian cell cycle. In: Mathematical Biosciences and Engineering. 2011 ; Vol. 8, No. 2. pp. 445-461.
Vider-Shalit, Tal ; Louzoun, Yoram. / MHC-I prediction using a combination of T cell epitopes and MHC-I binding peptides. In: Journal of Immunological Methods. 2011 ; Vol. 374, No. 1-2. pp. 43-46.
Kovjazin, Riva ; Volovitz, Ilan ; Daon, Yair et al. / Signal peptides and trans-membrane regions are broadly immunogenic and have high CD8+ T cell epitope densities : Implications for vaccine development. In: Molecular Immunology. 2011 ; Vol. 48, No. 8. pp. 1009-1018.
Sekiguchi, Debora R. ; Smith, Sara B. ; Sutter, Jennifer A. et al. / Circulating lymphocyte subsets in normal adults are variable and can be clustered into subgroups. In: Cytometry Part B - Clinical Cytometry. 2011 ; Vol. 80 B, No. 5. pp. 291-299.
Itzhack, Royi ; Louzoun, Yoram. / Random distance dependent attachment as a model for neural network generation in the Caenorhabditis elegans. In: Bioinformatics. 2010 ; Vol. 26, No. 5. pp. 647-652.
Atlan, H ; Louzoun, Y. / Emergence of Intentional Procedures in Self-Organizing Neural Networks, in Causality, Meaningful Complexity and Embodied Cognition. Causality, Meaningful Complexity and Embodied Cognition. Springer Netherlands, 2010. pp. 47-56 (Theory and Decision Library A).
Liberman, G ; Louzoun, Y. ; Bashat, DB. / 844 MRI tissue characterization in patients with glioblastoma multiforme. In: European Journal of Cancer, Supplement. 2010 ; Vol. 8, No. 5.
Itzhack, Royi ; Muchnik, Lev ; Erez, Tom et al. / Empirical extraction of mechanisms underlying real world network generation. In: Physica A: Statistical Mechanics and its Applications. 2010 ; Vol. 389, No. 22. pp. 5308-5318.
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Vider-Shalit, Tal ; Almani, Michal ; Sarid, Ronit et al. / The HIV hide and seek game : An immunogenomic analysis of the HIV epitope repertoire. In: AIDS. 2009 ; Vol. 23, No. 11. pp. 1311-1318.
Merbl, Y ; Itzchak, R ; ViderShalit, T et al. / A systems immunology approach to the host-tumor interaction: large-scale patterns of natural autoantibodies distinguish healthy and tumor-bearing mice. In: PLoS ONE. 2009 ; Vol. 4, No. 6.
Almani, M ; Raffaeli, S ; ViderShalit, T et al. / Human self-protein CD8+ T- cell epitopes are both positively and negatively selected. In: European Journal of Immunology. 2009 ; Vol. 39, No. 4. pp. 1056-1065.
ViderShalit, T ; Almani, M ; Sarid, R et al. / The HIV hide and seek game: an immunogenomic analysis of the HIV epitope repertoire. In: AIDS. 2009 ; Vol. 23, No. 11. pp. 1311-1318.
Almani, Michal ; Raffaeli, Shai ; Vider-Shalit, Tal et al. / Human self-protein CD8+ T-cell epitopes are both positively and negatively selected. In: European Journal of Immunology. 2009 ; Vol. 39, No. 4. pp. 1056-1065.
Anderson, SM ; Khalil, A ; Uduman, M et al. / Taking advantage: high-affinity B cells in the germinal center have lower death rates, but similar rates of division, compared to low-affinity cells. In: Journal of Immunology. 2009 ; Vol. 183, No. 11. pp. 7314-7325.
Merbl, Yifat ; Itzchak, Royi ; Vider-Shalit, Tal et al. / A systems immunology approach to the host-tumor interaction : Large-scale patterns of natural autoantibodies distinguish healthy and tumor-bearing mice. In: PLoS ONE. 2009 ; Vol. 4, No. 6.
Lavi, Orit ; Louzoun, Yoram ; Klement, Eyal. / Listeriosis : A model for the fine balance between immunity and morbidity. In: Epidemiology. 2008 ; Vol. 19, No. 4. pp. 581-587.
Ginodi, Ido ; Vider-Shalit, Tal ; Tsaban, Lea et al. / Precise score for the prediction of peptides cleaved by the proteasome. In: Bioinformatics. 2008 ; Vol. 24, No. 4. pp. 477-483.
Louzoun, Yoram ; Atlan, Henri. / The emergence of goals in a self-organizing network : A non-mentalist model of intentional actions. In: Neural Networks. 2007 ; Vol. 20, No. 2. pp. 156-171.
Muchnik, Lev ; Itzhack, Royi ; Solomon, Sorin et al. / Self-emergence of knowledge trees : Extraction of the Wikipedia hierarchies. In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 2007 ; Vol. 76, No. 1.
Louzoun, Y. ; Shnerb, N. M. ; Solomon, S. / Microscopic noise, adaptation and survival in hostile environments. In: European Physical Journal B. 2007 ; Vol. 56, No. 2. pp. 141-148.
Muchnik, L ; Louzoun, Y. ; Solomon, S. / Agent Based Simulation Design Principles—Applications to Stock Market. Practical Fruits of Econophysics. editor / Y. Louzoun. Springer, 2006. pp. 183-188
Louzoun, Yoram ; Vider, Tal ; Weigert, Martin. / T-cell epitope repertoire as predicted from human and viral genomes. In: Molecular Immunology. 2006 ; Vol. 43, No. 6. pp. 559-569.
Magori-Cohen, Reuma ; Louzoun, Yoram ; Kleinstein, Steven H. / Mutation parameters from DNA sequence data using graph theoretic measures on lineage trees. In: Bioinformatics. 2006 ; Vol. 22, No. 14. pp. e332-e340.
Nudelman, G. ; Louzoun, Y. / Cell surface dynamics : The balance between diffusion, aggregation and endocytosis. In: IEE Proceedings: Systems Biology. 2006 ; Vol. 153, No. 1. pp. 34-42.
Louzoun, Yoram ; Muchnik, Lev ; Solomon, Sorin. / Copying nodes versus editing links : The source of the difference between genetic regulatory networks and the WWW. In: Bioinformatics. 2006 ; Vol. 22, No. 5. pp. 581-588.
Muchnik, L ; Itzhak, R ; Solomon, S et al. / Self-Emergence of Knowledge Trees: Extraction of the Wikipedia Hidden Hierarchies. In: Proceedings of Wikimania. 2005.
Nudelman, German ; Louzoun, Yoram. / Antigen epitope density dependent cell surface discrimination and the role of the lipid rafts. Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'04. editor / F. Valafar ; H. Valafar. 2004. pp. 429-435 (Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'04).
Li, Y ; Louzoun, Y. ; Weigert, M. / Editing anti-DNA B cells by Vλx. In: No matches for: The Journal of experimental medicine. 2004 ; Vol. 199, No. 3. pp. 337-346.
Gilboa, Asaf ; Shalev, Arieh Y. ; Laor, Lucian et al. / Functional connectivity of the prefrontal cortex and the amygdala in posttraumatic stress disorder. In: Biological Psychiatry. 2004 ; Vol. 55, No. 3. pp. 263-272.
Goldenberg, Jacob ; Libai, Barak ; Louzoun, Yoram et al. / Inevitably reborn : The reawakening of extinct innovations. In: Technological Forecasting and Social Change. 2004 ; Vol. 71, No. 9. pp. 881-896.
Nudelman, G. ; Louzoun, Y. / The role of lipid rafts in cell surface BCR antigen binding dynamics. In: Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 2004 ; Vol. 26 I. pp. 667-670.
Goldenberg, J ; Libai, J ; Louzoun, Y. et al. / Inevitably reborn: the reawakening of extinct innovations. In: Technological Forecasting and Social Change. 2004 ; Vol. 71, No. 9. pp. 881-896.
Bonne, Omer ; Louzoun, Yoram ; Aharon, Itzhak et al. / Cerebral blood flow in depressed patients : A methodological comparison of statistical parametric mapping and region of interest analyses. In: Psychiatry Research - Neuroimaging. 2003 ; Vol. 122, No. 1. pp. 49-57.
Bonne, O ; Lester, H ; Louzoun, Y. / Long term modulation of cerebral perfusion in remitted depressed patients. In: Biological Psychiatry. 2003 ; Vol. 53, No. 8. pp. 172-173.
Louzoun, Yoram ; Solomon, Sorin ; Goldenberg, Jacob et al. / World-Size Global Markets Lead to Economic Instability. In: Artificial Life. 2003 ; Vol. 9, No. 4. pp. 357-370.
Bonne, O ; Louzoun, Y. ; Aharon, I et al. / Cerebral blood flow in depressed patients: a methodological comparison of statistical parametric mapping and region of interest analyses. In: Psychiatry Research. 2003 ; Vol. 122, No. 1. pp. 49-57.
Kleinstein, Steven H. ; Louzoun, Yoram ; Shlomchik, Mark J. / Estimating Hypermutation Rates from Clonal Tree Data. In: Journal of Immunology. 2003 ; Vol. 171, No. 9. pp. 4639-4649.
Louzoun, Yoram ; Luning Prak, Eline ; Litwin, Sam et al. / D is for different - Differences between H and L chain rearrangement. In: Seminars in Immunology. 2002 ; Vol. 14, No. 3. pp. 239-241.
Louzoun, Y. ; Prak, EL ; Litwin, S. / D is for different—differences between H and L chain rearrangement. In: Seminars in Immunology. 2002 ; Vol. 14, No. 3. pp. 239-241.
Louzoun, Yoram ; Friedman, Tzivia ; Luning Prak, Eline et al. / Analysis of B cell receptor production and rearrangement. Part I. Light chain rearrangement. In: Seminars in Immunology. 2002 ; Vol. 14, No. 3. pp. 169-190.
Louzoun, Y. ; Solomon, S. / Power Law Volatility Auto-Correlations in Stochastic Logistic Systems. In: Computing in Economics and Finance 2002. 2002 ; Vol. 202.
Shnerb, N. M. ; Bettelheim, E. ; Louzoun, Y. et al. / Adaptation of autocatalytic fluctuations to diffusive noise. In: Physical Review E. 2001 ; Vol. 63, No. 2 I. pp. 21103-21101.
Louzoun, Yoram ; Atlan, Henri ; Cohen, Irun R. / Modeling the influence of TH1- and TH2-type cells in autoimmune diseases. In: Journal of Autoimmunity. 2001 ; Vol. 17, No. 4. pp. 311-321.
Louzoun, Y. ; Weigert, M ; Bhanot, G. / A New Paradigm for B-Cell Activation and Tolerance. In: Princeton University, Molecular Biology Preprint. 2001.
Hershberg, Uri ; Louzoun, Yoram ; Atlan, Henri et al. / HIV time hierarchy : Winning the war while, loosing all the battles. In: Physica A: Statistical Mechanics and its Applications. 2001 ; Vol. 289, No. 1-2. pp. 178-190.
Louzoun, Y. ; Solomon, S ; Atlan, H et al. / Microscopic Discrete Proliferating Components Cause the Self-Organized Emergence of Macroscopic Adaptive Features in Biological Systems. In: arXiv preprint nlin/0006043. 2000.
Chisin, R ; Bonne, O ; Brandes, D et al. / The sequelae of exposure to trauma: Cerebral blood flow and psychometric correlates in post traumatic stress disorder. In: Journal of Nuclear Medicine. 2000 ; Vol. 41, No. 5.
Louzoun, Y. ; Cohen, I ; Atlan, H. / Destruction of CD4 T lymphocytes alone cannot account for their long-term decrease in AIDS. In: arXiv preprint math/0008052. 2000.
Shnerb, Nadav M. ; Louzoun, Yoram ; Bettelheim, Eldad et al. / The importance of being discrete : Life always wins on the surface. In: Proceedings of the National Academy of Sciences of the United States of America. 2000 ; Vol. 97, No. 19. pp. 10322-10324.
